Acquadro Alberto
Projects

Author: Gianpiero Pescarmona
Date: 11/11/2016

Description

Uniprot	protein	EQ	n. AA	function
F4YGD1_SOLME	Photosystem II reaction center protein Z	0	62	photosynthesis
Q4ADE5_SOLME	PR-4 homolog	0	xx	defense response to bacterium
A0A165BB76_SOLME	PetN	0	xx	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
G9BG71_SOLME	Ribosomal protein L32	0	xx	chloroplast, ribosome
A0A168RC25_SOLME	Cytochrome b6-f complex subunit 8	0	xx	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
		0	xx
		0	xx
		0	xx
		0	xx
		0	xx

solo SOLME

Plants AA

cyrcadian rythm

Man (Day/Night)

ARATH (Day/Night)

TOC1=APRR1

+ ZTL/ADO1

Comments

2017-04-03T10:13:39 - Annamaria Vernone

Uniprot	Protein	EQ	n. AA	Function	Subcellular location
F4YGD1_SOLME	Photosystem II reaction center protein Z	0	62	Biological process: photosynthesis; photosystem II stabilization	Chloroplast Subcellular location: Cellular thylakoid membrane, Multi-pass membrane protein
Q4ADE5_SOLME	PR-4 homolog	0	65	Biologica process: defense response to bacterium, defense response to fungus	?????
A0A165BB76_SOLME	PetN	0	28	Molecular function: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; Biological process: cytochrome complex assembly	Chloroplast
G9BG71_SOLME	Ribosomal protein L32	0	31	Ribonucleoprotein, Ribosomal protein	Chloroplast, ribosome
A0A168RC25_SOLME	Cytochrome b6-f complex subunit 8	0	29	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	Cytochrome b6f complex, integral component of membrane, plastid, thylakoid membrane Subcellular location: Cellular thylakoid membrane, single-pass membrane protein
A0A168RDB0_SOLME	Ribosomal protein L23	0	55	Molecular function: structural constituent of ribosome; Biological process:translation	Chloroplast
A0A161IT32_SOLME	Photosystem II reaction center protein	0	40	One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H2O, generating O2 and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation; Biological process: photosynthesis	Chloroplast, photosystem II reaction center, thylakoid membrane, integral component of membrane, Subcellular location: Cellular thylakoid membrane, single-pass membrane protein
A0A168RCI2_SOLME	Cytochrome b6-f complex subunit 6	0	31	Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetL is important for photoautotrophic growth as well as for electron transfer efficiency and stability of the cytochrome b6-f complex; Molecular function: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity; Biological function: photosynthesis, oxidation-reduction process	Chloroplast, cytochrome b6f complex, integral component of membrane, thylakoid membrane, Subcellular location: Cellular thylakoid membrane, Single-pass membrane protein
A0A165BBG3_SOLME	Photosystem I reaction center subunit VIII	0	36	May help in the organization of the PsaL subunit; Biological process: photosynthesis	Chloroplast, Subcellular location: Cellular thylakoid membrane, single-pass membrane protein
F4YG32_SOLME	Putative uncharacterized protein	0	22	??	??
A0A168RCF6_SOLME	Cytochrome b559 subunit beta	0	39	This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H2O, generating O2 and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Cofatctor: heme b; Metal binding: iron (heme axial ligand); shared with alpha subunit); Molecular function:electron carrier activity, heme binding, iron ion binding Biological function: photosynthetic electron transport chain	Chloroplast thylakoid membrane, integral component of membrane, Cellular thylakoid membrane; photosystem II reaction center, Subcellular location: Cellular thylakoid membrane, Single-pass membrane protein, Plastid › chloroplast thylakoid membrane
G9BGI1_SOLME	COSII_At1g50020-like protein	0	11	??	??
F4YG31_SOLME	Putative uncharacterized protein	0	19	??	??
A0A0K0PWY4_SOLME	xx	0.231	xx	xx	xx
A0A160I996_SOLME	xx	0.250	xx	xx	xx
Q9SLQ3_SOLME	xx	0.250	xx	xx	xx
A0A168RCN4_SOLME	xx	0.333	xx	xx	xx
..	..	..	..	..	..
..	..	..	..	..	..
..	..	..	..	..	..
IPR_SOLME	xx	3.000	52	xx	xx
RL5_SOLME	xx	3.000	121	xx	xx
F4YG62_9SOLN	xx	3.000	108	xx	xx
A0A168RCR4_SOLME	xx	3.000	73	xx	xx
A0A168RCL9_SOLME	xx	3.000	66	xx	xx
A0A1B2LPA8_SOLME	xx	3.000	70	xx	xx
A0A060N2B3_SOLME	xx	3.000	250	xx	xx
A0A168RCV0_SOLME	xx	3.000	160	xx	xx
D5LXP0_SOLME	xx	3.000	186	xx	xx
D7PQV3_SOLME	xx	3.000	105	xx	xx
A0A165BBU4_SOLME	xx	3.000	174	xx	xx
A0A060PXZ6_SOLME	xx	3.000	316	xx	xx
Q0PCF1_SOLME	xx	3.000	178	xx	xx
C76A2_SOLME	xx	3.143	505	xx	xx
Q9ST29_SOLME	xx	3.167	240	xx	xx
Q4ADE7_SOLME	xx	3.167	266	xx	xx
Q38MJ6_SOLME	xx	3.167	239	xx	xx
Q38MK7_SOLME	xx	3.167	239	xx	xx
C75A2_SOLME	xx	3.200	513	Catalyzes the 3'5'-hydroxylation of naringenin and eriodictyol to form 5,7,3,'4',5'-pentahydroxyflavanone and 3',5'-hydroxylation of dihydrokaempferol and dihydroquercetin to form dihydromyricetin. Catalytic activity A flavanone + 2 NADPH + 2 O2 = a 3',5'-dihydroxyflavanone + 2 NADP+ + 2 H2O. Cofactor:heme Pathway:anthocyanin biosynthesis This protein is involved in the pathway anthocyanin biosynthesis, which is part of Pigment biosynthesis.	Metal binding:Iron (heme axial ligand)
C76A1_SOLME	Cytochrome P450 76A1	3.333	467	Belongs to the cytochrome P450 family. Molecular function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, monooxygenase activity, iron ion binding, heme binding; Molecule processing: Cytochrome P450 76A1	??
C3VEV1_SOLME	HRS201-like protein	3.333	212	transferase activity, transferring acyl groups other than amino-acyl groups	??
Q43640_SOLME	Dioxygenase	3.375	341	dioxygenase activity, metal ion binding	??
A0A168RBQ1_SOLME	Photosystem II protein D1	3.500	353	Photosystem II (PSII) is a light-driven water: plastoquinone oxidoreductase that uses light energy to abstract electrons from H2O, generating O2 and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. Catalytic activity 2 H2O + 2 plastoquinone + 4 light = O2 + 2 plastoquinol.UniRule annotation Cofactor Note: The D1/D2 heterodimer binds P680, chlorophylls that are the primary electron donor of PSII, and subsequent electron acceptors. It shares a non-heme iron and each subunit binds pheophytin, quinone, additional chlorophylls, carotenoids and lipids. D1 provides most of the ligands for the Mn4-Ca-O5 cluster of the oxygen-evolving complex (OEC). There is also a Cl(-1) ion associated with D1 and D2, which is required for oxygen evolution. The PSII complex binds additional chlorophylls, carotenoids and specific lipids. Molecular function: chlorophyll binding, electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity, iron ion binding, oxygen evolving activity; Biological process: photosynthetic electron transport in photosystem II, protein-chromophore linkage, response to herbicide	Cellular thylakoid membrane, protein
A9XLC9_SOLME	Uncharacterized protein	3.556	427	??	??
A0A0C4LBD9_SOLME	Solanum melongena cultivar Pusa Uttam ethylene responsive factor 07 mRNA	3.750	191	Biological process: transcription, DNA-templated; Molecular function: DNA binding, transcription factor activity, sequence-specific DNA binding	Nucleus
A0A160I998_SOLME	Ribosomal protein S8	4.000	134	Molecular function: structural constituent of ribosome; Biological process: translation	plastid, ribosome
A0A165BBX5_SOLME	30S ribosomal protein S8, chloroplastic	4.000	134	Molecular function: rRNA binding, structural constituent of ribosome; Biological process: translation	Plastid › chloroplast
D7PQV8_SOLME	Nucleotide binding site and leucine rich repeat protein 7	4.000	179	Molecular function: ADP binding	??
W8QTJ4_SOLME	Ovate	4.250	358	??	??
A0A076ED18_SOLME	Dehydroascorbate reductase-like protein	4.250	198	??	??
D7PQV9_SOLME	Nucleotide binding site and leucine rich repeat protein 8	4.333	172	Molecular function: ADP binding	??
Q715Z7_SOLME	Hydroxy methyl glutaryl coenzyme A (It is also an intermediate in the metabolism of leucine)	4.333	185	Molecular function: hydroxymethylglutaryl-CoA reductase (NADPH) activity, coenzyme binding; Biological process: coenzyme A metabolic process	Transmembrane
D7PQV7_SOLME	Nucleotide binding site and leucine rich repeat protein 6	4.500	177	Molecular function: ADP binding	??
Q2V0F0_SOLME	Lipoxygenase	4.500	134	Molecular function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; metal ion binding	??
A9XLD3_SOLME	Uncharacterized protein	4.805	814	nutrient reservoir activity	??
D7PQV5_SOLME	Nucleotide binding site and leucine rich repeat protein 4	5.000	171	Molecular function: ADP binding	??
A0A0C4LFE5_SOLME	Solanum melongena cultivar Pusa Uttam ethylene responsive factor 20 mRNA	5.000	161	Molecular function: DNA binding, transcription factor activity, sequence-specific DNA binding, Biological process: transcription, DNA-templated	Nucleus
A0A0C5LC03_SOLME	Auxin-responsive protein	5.333	185	Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Biological process: regulation of transcription, DNA-templated, transcription, DNA-templated, auxin-activated signaling pathway	Nucleus
A0A060APU0_SOLME	NBS-LRR resistance protein	5.500	153	Molecular function: ADP binding	??
C1KJ93_SOLME	ABA 8'-hydroxylase	5.667	145	Molecular function: Monooxygenase, oxidoreductase, heme binding, iron ion binding	??

Attachments

file	user	date
ARATH_CYRC_CH1.png	gp	16/04/2017
ARATH_CYRC_CH2.png	gp	16/04/2017
ARATH_clock_1_ch1.png	gp	16/04/2017
ARATH_clock_1_ch1corretto.png	gp	16/04/2017
ARATH_clock_1_ch2.png	gp	16/04/2017
CLOCK_SIRT1_ch1.png	gp	16/04/2017
CLOCK_SIRT1_ch2.png	gp	16/04/2017
SIRT1_CLOCK_ch1.png	gp	16/04/2017
SIRT1_CLOCK_ch2.png	gp	16/04/2017
Melanzana_EQ.png	gp	11/11/2016
melanzana_EQ.xls	gp	11/11/2016

Acquadro AlbertoProjects

cyrcadian rythm

Man (Day/Night)

ARATH (Day/Night)

TOC1=APRR1

+ ZTL/ADO1

Acquadro Alberto
Projects