Pathways List

Pathways:

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Acid Vesicles
- Autophagy
  - ATG1 (ULK1_HUMAN)
  - Autophagy (neuronal)
- CFTR (Cystic Fibrosis Transmembrane Conductance Regulator)
- Cubilin and Megalin
- Lysosomal Enzymes
- Na+/H+ Antiport
- V-ATPase
Aminoacids Metabolism
- Arginine
- Aspartate and Asparagine
- Choline
- Cysteine
  - Cystinuria
- Glutamate central role
- Glutamine
- Glycine
- Methionine
  - Homocysteine
- One-Carbon Units Metabolism
- Phenylalanine and Tyrosine
  - Phenylalanine Hydroxylase (PAH)
- Serine
- Threonine
- Tryptophan
  - Indoleamine 2,3-dioxygenase (IDO)
  - Tryptophan serum fall during infection
Cancer Metabolism
- Oncogene
  - Fumarate Hydratase
Carbohydrate Metabolism
- Galactose Metabolism
- Glucose Metabolism
- Glycosaminoglycans
  - Heparin
  - Hyaluronic acid (HA)
- Inositol Metabolism
  - Glycosylphosphatidyl inositol (GPI) Anchor
Cell Proliferation
- Angiogenesis
- Cell Cycle
- Cell Differentiation
- In Vitro Cell Cultures
Circadian Rhythms
- Clock Related Genes
Coagulation
- Fibrinogen
- Haemophilia
- Prothrombin
- Thrombotic Genetic Risk Factors
  - Genetic Risk Factors
- Thrombotic events
  - Bacterial infection and cardiovascular disease
  - some statistics
Cofactors
- ATP
- Biotin
- Coenzyme Q
- Folic Acid, BH4 and Neopterin
  - BH4 and Neopterin
  - MTHFR polymorphism
- GTP
- NAD and NADP
  - NADH/NAD
    - Sirtuins
  - NADPH/NADP
- Vitamin K as cofactor
Enzymes
- 5 alpha reductase
- Alcohol dehydrogenase (ADH)
- aromatase
Hormones
- Epinephrine (Adrenaline)
  - Adrenergic Receptors
- Hormones acting through Nuclear Receptors
- IGF system
- Insulin
- Parathormone
- Pituitary Hormones
  - Prolactin and Growth Hormone
    - Growth Hormone
    - Prolactin
  - TSH
    - TRH
    - TSH Receptor
Inflammation
- Anti-inflammatory Therapy
- Inflammasomes
Inorganic Ions Metabolism
- Calcium
  - Calcium Metabolism
  - Ipocalcemia
- Chloride
- Copper
  - Ceruloplasmin 2
  - Copper IT
- Iodine
- Iron Metabolism
- Manganese
- Phosphate
- Potassium
- Potassium 2
- Selenium
- Sodium
- Zinc
Lipids Metabolism
- Fatty Acids Transport
- Mevalonate Pathway
- Phospholipids
- Sphingolipids
- beta - Oxidation
Membrane Transport
- Active Transports
  - ABC transporters
- Nucleus-Cytosol Transport
- Passive Transport
  - Calcium Channels
Nucleic Acids Metabolism
- DNA Breaks and Repair
  - Ataxia Telangiectasia Mutated Kinase (ATM)
- DNA Expansions
- DNA Methylation and Demethylation
- DNA Transcription
- Epigenetics
  - Genomic Imprinting
    - Examples of human genome imprinting
- Histones
  - Histone Acetyltransferases
  - Histone Deacetylases
- Nucleotides metabolism
  - Cyclic Nucleotides Metabolism
    - cAMP synthesis
    - cGMP synthesis
- Purines and Pyrimidines Synthesis
- mRNA Alternative Splicing
Nutrients
- Diet
  - Glycemic Index
- Fats
  - Cholesterol Absorption
- Micronutrients
  - Minerals
  - Vitamins
- Miscellaneous dietary supplements
- Regulation of food intake
Proteins Metabolism
- Proteins Post-translational Modifications
  - Vitamin K dependent Carboxylation
- a. Protein synthesis
  - Cytoplasmic protein synthesis
  - Mitochondrial Protein Synthesis
- b. Protein Degradation
  - Metalloproteinases
  - Proteasome
- c. Protein Recycling
Respiration
- Blood Flow - Hemoreology
- CO2 Production and Transport
- Oxygen transport
- Respiratory Chain
Signaling Pathways
- Activation by Proteolysis
  - Intramembrane Proteolysis
    - Amyloid Precursor Protein (APP)
    - Teneurin
  - Renin-Angiotensin-Aldosterone System
- Calcium Signaling
  - Nitric Oxide
- Cytokines
- Growth Factors
- Histamine
- Lipids Signaling
- Membrane Potential and Ions Asimmetry
- Membrane Receptors
  - Frizzled (ligand WNT)
  - Hedgehog
- Metabolic markers
  - Adiponectin
  - Ghrelin
  - Leptin
  - Resistin
- Neurotransmitters
- Nucleotides Derivatives
  - Adenosine
  - cAMP
  - cGMP
- Protein Phosphorylation (Protein Kinases)
- Redox Signaling
- Transcription Factors
  - HIF
    - Estrogen-Related Receptor (ERR)
  - HNF1b
  - Heat-Shock Factor (HSF)
  - IFI16
  - Interferons
    - Interferon gamma
  - JAK/STAT pathway
    - STAT
    - STAT3
  - JNK
  - NF-KB
  - Notch
  - PPAR bis
  - RXR
  - Ras-Raf-MEK-ERK-MAPK pathway
    - RAS
  - SRY (Sex Determining Region Y)
  - TFEB
  - c-Myc
  - mTOR
  - p53
    - PUMA
- VEGF
  - Neuropilin 1
Various
Water Metabolism
- Disorders of water balance
- Thirst
- Water Loss
- Water Production
- Water Uptake